arXiv:cs.LG· Marko Tvrdic, Justin Richmond Domingo, Jae Ann Buenaluz, Jydell Ashley Palomo Penollar, Edmayelle Villavicencio Alforja, Jobi Fallaeria Subosa, Gabriel Ocana-Santero·· 4 小时前
跨物种表征学习对齐小鼠与人类神经动态,追踪临床药效
Cross-species representation learning aligns mouse and human neural dynamics and tracks clinical drug efficacy
AI 导读
研究团队提出双规则对比学习框架,通过学习按生物状态而非物种组织的表征,直接从小鼠与人类电生理数据中对齐对应状态。该框架在癫痫中解析了三种小鼠模型与异质性人类患者群体的关系,并在十个模型-药物组合中,通过动物表征向人类健康状态的移动回溯性地追踪到已知临床药效,包括一种疾病特异性有害效应。框架还发现 Fmr1 敲除小鼠与人类 16p11.2 拷贝数变异携带者共享疾病相关神经动态。
正文
Abstract:Preclinical models poorly predict human drug efficacy, particularly in neurological disorders. Neural activity offers a uniquely rich source of translational information because it captures high-dimensional variation in nervous-system function that can be measured in both animals and humans. However, its high dimensionality makes it difficult to distinguish conserved disease-related features from variation arising from species, recording modality and experimental context. Here, we test whether shared neural dynamics can be identified directly from electrophysiology data by learning representations organized by biological state rather than species. We develop a dual-rule contrastive learning framework that aligns corresponding mouse and human states while preserving separation between distinct phenotypes. This framework recovered conserved sensory-response structure across species and, in epilepsy, resolved distinct relationships between three mouse models and heterogeneous human patient populations. When treated animals were projected into a frozen cross-species representation, drug-induced movement towards the human-aligned healthy state retrospectively tracked known clinical efficacy across ten model-drug combinations including a disease-specific detrimental effect. The framework also identified shared disease-associated neural dynamics between Fmr1-knockout mice and human 16p11.2 copy-number variant carriers despite differences in genetic aetiology and recording modality. Together, these findings show the potential of cross-species neural representation learning to map heterogeneous human disease onto experimentally tractable preclinical states and assess whether interventions restore human-relevant circuit function.
| Comments: | 33 pages, 5 figures; supplementary material included (2 supplementary figures, 3 supplementary tables) |
| Subjects: | Quantitative Methods (q-bio.QM); Machine Learning (cs.LG); Neurons and Cognition (q-bio.NC) |
| Cite as: | arXiv:2610.11222 [q-bio.QM] |
| (or arXiv:2610.11222v1 [q-bio.QM] for this version) | |
| https://doi.org/10.48550/arXiv.2610.11222 arXiv-issued DOI via DataCite (pending registration) |
Submission history
From: Gabriel Ocana Santero [view email]
[v1]
Thu, 8 Oct 2026 04:19:41 UTC (6,134 KB)
来源:arXiv:cs.LG · arxiv.org